rs29461549 SNP Detail

Summary

• ID
  rs29461549
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:57396253 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTCAA ATAGAGAAGA GTCCACAGGT
  R
  AAACATGAAT TATAAACTAG CCAGT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss38830379	mCV23214476	ABI	CRAMUS_MOUSE	f	SNP	G	A	G
ss132170427	ENSMUSSNP4141710	ENSEMBL	ENSEMBL_Sanger	f	SNP	G		G
ss323682967	CHEV_11_57318929	CHEVERUD	SCREENING_POP	f	SNP				G	G
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29461549					SNP	G	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:57396253 () rs orientation: forward

Symbol	Name	Function Class
Fam114a2	family with sequence similarity 114, member A2	within coordinates
Tssr108113	transcription start site region 108113	1614 bp downstream
Tssr108114	transcription start site region 108114	1675 bp downstream
Tssr108115	transcription start site region 108115	1683 bp downstream
Tssr108116	transcription start site region 108116	1702 bp downstream