rs29462562 SNP Detail

Summary

• ID
  rs29462562
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:116330836 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GGTTTAGCCA GGCCATCTTT TCCATGCAGT CACAAGTGTG
  ACCACAGGAG ACTTGAGAGG GACAGTAACT TTATTCTCCA GGGGCAGCCT CCACCCTGGG
  R
  CACCCCTGGC CAAGCCCTTT GCCCGTGGTG AGAAACCCGT TTCTTGGCTG TTTCCTGCCG
  CTCTTTCCTG TGTGATTTTT GTCGCCCCCT TTCTCACAC                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss38833907	mCV24181000	ABI	CRAMUS_MOUSE	f	SNP	A	A	G	A
ss132886595	ENSMUSSNP1666917	ENSEMBL	ENSEMBL_Sanger	f	SNP				A
ss323865677	CHEV_11_116301324	CHEVERUD	SCREENING_POP	f	SNP					A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29462562					SNP	A	A	G	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:116330836 () rs orientation: forward

Symbol	Name	Function Class
Qrich2	glutamine rich 2	1315 bp downstream
Rr460289	regulatory region 460289	within coordinates
Ubald2	UBA-like domain containing 2	933 bp downstream