rs29463050 SNP Detail

Summary

• ID
  rs29463050
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:72907978 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GGGGAGCCAG ATTCAGTTCC CAGCACCCAC ACAGTGGCTC
  ACAACTCTCC GTAAGCACAC ACAGATGCAC ATATAGGCAT ACATGTAGGC AAAACAGTCA
  Y
  CCACATAAAA TAAAGAGTTA GCATCGACCC TTCATTATTT TTCTCCATTC CAAAACCTGG
  AATGCATACG TGATAACTGG AGTTCCAGCC CCTATTCAG                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss38834121	mCV23952896	ABI	CRAMUS_MOUSE	f	SNP	C	T
ss132418979	ENSMUSSNP6894511	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs29463050					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:72907978 () rs orientation: forward

Symbol	Name	Function Class
4732414G09Rik	RIKEN cDNA 4732414G09 gene	within coordinates
Camkk1	calcium/calmodulin-dependent protein kinase kinase 1, alpha	1856 bp upstream
Cpgi3228	CpG island 3228	1343 bp proximal
P2rx1	purinergic receptor P2X, ligand-gated ion channel, 1	1952 bp downstream
Rr369285	regulatory region 369285	1758 bp downstream
Rr402708	regulatory region 402708	1579 bp upstream
Tssr102875	transcription start site region 102875	1834 bp upstream