rs29465285 SNP Detail

Summary

• ID
  rs29465285
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:97099325 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATTTC AGATGCCCTG GCGTTGGAGG
  Y
  TGACATGGGT TCAGGAGACT GAACT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss38836201	mCV23218661	ABI	CRAMUS_MOUSE	f	SNP	C	T	C
ss132694019	ENSMUSSNP1850951	ENSEMBL	ENSEMBL_Sanger	f	SNP		T
ss323825116	CHEV_11_97069813	CHEVERUD	SCREENING_POP	f	SNP				T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs29465285					SNP	C	T	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:97099325 () rs orientation: forward

Symbol	Name	Function Class
Npepps	aminopeptidase puromycin sensitive	within coordinates
Rr455697	regulatory region 455697	1727 bp proximal
Rr455698	regulatory region 455698	1954 bp proximal
Tssr110404	transcription start site region 110404	1482 bp upstream