rs29467829 SNP Detail

Summary

• ID
  rs29467829
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:72907610 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GCATTTGTTG TTGGTGGTGG TGGTAGGTTT TTTCCCCTTT
  CTTTCCTTTT TTTGTTTTGT TTTGCTTTGC TTTGTTTCGA GATACGTTTC TCTGTGTAGC
  Y
  TTGGCTGTTC TGGAACTCGC TCTATAGTCC AGGCTGGCCT TGAACTTGGA GATCTACCTG
  CGTCTGCCTC TGAGTGTTGG GATTAAAGGG ATCCACCAC                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss38837637	mCV23952884	ABI	CRAMUS_MOUSE	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs29467829					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:72907610 () rs orientation: forward

Symbol	Name	Function Class
4732414G09Rik	RIKEN cDNA 4732414G09 gene	within coordinates
Cpgi3228	CpG island 3228	1711 bp proximal
P2rx1	purinergic receptor P2X, ligand-gated ion channel, 1	1584 bp downstream
Rr247151	regulatory region 247151	1390 bp proximal
Rr369285	regulatory region 369285	1390 bp downstream
Rr402708	regulatory region 402708	1947 bp upstream