rs29468347 SNP Detail

Summary

• ID
  rs29468347
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:83336423 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTGCC ATGTGGGGAT CAGAGGACAA
  M
  CTGGGGAACT CAATTCTCAT CTTCT                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss38837440	mCV22343065	ABI	CRAMUS_MOUSE	f	SNP	C	A
ss132469323	ENSMUSSNP3591619	ENSEMBL	ENSEMBL_Sanger	f	SNP	C		A
ss323767179	CHEV_11_83259099	CHEVERUD	SCREENING_POP	f	SNP				C	A
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29468347					SNP	C	A	A	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:83336423 () rs orientation: forward

Symbol	Name	Function Class
Cpgi3416	CpG island 3416	276 bp distal
Mmp28	matrix metallopeptidase 28 (epilysin)	within coordinates
Rr452961	regulatory region 452961	355 bp distal