rs29470857 SNP Detail

Summary

• ID
  rs29470857
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:84073164 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TATCATGTG AGCCTTGGGG AATGAACAGA
  GATCATCATC TCACAACAGT CCCCTTTACC AGCTGAGCTA CCTTCTGGGA TTACAGGTGT
  GTGCCGCCAT ATTTGTTTTG TTTTTGACgt gtgtgtgtgt gtgtgtgtgt gtgtgtgtat
  R
  CTCTTGTGCA AGCTTACACC aggtcagaag acaatttatg agagttgggt ctctcctatc
  atgtgggttc ctggCAAAAA GTGCTGTTAT GTGTTGAGCT GTCTCCTTGG CCTTCAAATC
  TTTTTtttaa tgcagtgctg gggattgaac                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	LG/J	SM/J
ss38841896	mCV24263429	ABI	CRAMUS_MOUSE	f	SNP	A	A	G
ss132477387	ENSMUSSNP5015927	ENSEMBL	ENSEMBL_Sanger	f	SNP		A
ss323769379	CHEV_11_83995840	CHEVERUD	SCREENING_POP	f	SNP				A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	LG/J	SM/J
rs29470857					SNP	A	A	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:84073164 () rs orientation: forward

Symbol	Name	Function Class
Acaca	acetyl-Coenzyme A carboxylase alpha	within coordinates
Cpgi3430	CpG island 3430	1830 bp distal
Rr453130	regulatory region 453130	1614 bp distal
Tssr103803	transcription start site region 103803	1978 bp downstream