rs29473559 SNP Detail

Summary

• ID
  rs29473559
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:108256760 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCACC AAAATCTCAC CTTAGCACCT
  S
  TTAAATATAG GTTACAGTGT GCAAC                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss38845897	mCV24927675	ABI	CRAMUS_MOUSE	f	SNP	G	C	G
ss132777847	ENSMUSSNP5489509	ENSEMBL	ENSEMBL_Sanger	f	SNP	G		G
ss323843138	CHEV_11_108227248	CHEVERUD	SCREENING_POP	f	SNP				C	G
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29473559					SNP	G	C	G	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:108256760 () rs orientation: forward

Symbol	Name	Function Class
Gm36709	predicted gene, 36709	896 bp downstream
Rr458663	regulatory region 458663	1538 bp distal
Rr458664	regulatory region 458664	383 bp distal
Rr458665	regulatory region 458665	16 bp distal