rs29474436 SNP Detail

Summary

• ID
  rs29474436
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:72904621 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GAAACTAGGG TCCAGAGTGG CAGGATTTAG CCAGGACCAC
  AGTCAGTGGG GACCACTGTA GGACATGGAA GATCTGTATC TGCCCCAGAT TCCCATTCTC
  Y
  GTCCCTGCCC CTCCTTGTCC TCAGGCCACA GTTCTCTGTG ATCTCTTATT GCTCCACATC
  CTGCCTAAGA GGCACTACTA CAAGCAGAAG AAGTTCAAG                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss38846375	mCV23952588	ABI	CRAMUS_MOUSE	f	SNP	C	C	C	C	T
ss132418947	ENSMUSSNP1334036	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	C		T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29474436					SNP	C	C	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:72904621 () rs orientation: forward

Symbol	Name	Function Class
P2rx1	purinergic receptor P2X, ligand-gated ion channel, 1	within coordinates
Rr369285	regulatory region 369285	1398 bp upstream