rs29475092 SNP Detail

Summary

• ID
  rs29475092
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:115052153 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AACCC TCCTTCTGGA AGCGTGCACG
  K
  GCTTTTTCTT CAGCACACAC GAGCA                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss38846943	mCV22627605	ABI	CRAMUS_MOUSE	f	SNP	T	G	G	G
ss132871958	ENSMUSSNP3715593	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	G		G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29475092					SNP	T	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:115052153 () rs orientation: forward

Symbol	Name	Function Class
Cpgi4109	CpG island 4109	1593 bp proximal
Gm72084	predicted gene, 72084	918 bp downstream
Rab37	RAB37, member RAS oncogene family	within coordinates
Rr369433	regulatory region 369433	1516 bp upstream
Rr403111	regulatory region 403111	1735 bp upstream
Rr459780	regulatory region 459780	1113 bp distal
Rr459781	regulatory region 459781	247 bp distal
Rr459782	regulatory region 459782	130 bp proximal
Rr459783	regulatory region 459783	1524 bp proximal
Tssr111730	transcription start site region 111730	1802 bp downstream