rs29476844 SNP Detail

Summary

• ID
  rs29476844
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:67189606 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATAGG GTACTGAGCC AGAAAAACAG
  Y
  ATCCATTGTT CCTGGTATCA CACCT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss38850914	mCV23989190	ABI	CRAMUS_MOUSE	f	SNP	C	C	T	C
ss132327431	ENSMUSSNP3049884	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C		C
ss323719456	CHEV_11_67112282	CHEVERUD	SCREENING_POP	f	SNP					C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29476844					SNP	C	C	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:67189606 () rs orientation: forward

Symbol	Name	Function Class
Cpgi3068	CpG island 3068	50 bp distal
Myh8	myosin, heavy polypeptide 8, skeletal muscle, perinatal	within coordinates
Tssr102227	transcription start site region 102227	300 bp downstream
Tssr102228	transcription start site region 102228	547 bp upstream
Tssr108547	transcription start site region 108547	1029 bp upstream
Tssr108548	transcription start site region 108548	247 bp upstream
Tssr108549	transcription start site region 108549	542 bp downstream