rs29478417 SNP Detail

Summary

• ID
  rs29478417
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:109221640 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CACTT CTCACTGGTC CGTGAGCACA
  Y
  GGGTTAACTG TCTAAGAGGA AACAG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss38851797	mCV24369057	ABI	CRAMUS_MOUSE	f	SNP	T	T	C	T
ss132784339	ENSMUSSNP3762932	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T		T
ss323845217	CHEV_11_109192128	CHEVERUD	SCREENING_POP	f	SNP					C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29478417					SNP	T	T	C	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:109221640 () rs orientation: forward

Symbol	Name	Function Class
Gm72366	predicted gene, 72366	within coordinates
Rr238867	regulatory region 238867	1961 bp proximal
Rr248322	regulatory region 248322	1440 bp distal
Rr369414	regulatory region 369414	525 bp upstream