rs29478784 SNP Detail

Summary

• ID
  rs29478784
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:83600201 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGAAA GAGAGAGACA GACACAGACA
  Y
  AGACACAGAC AGACAGACGG ACAGG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss38851231	mCV23453955	ABI	CRAMUS_MOUSE	f	SNP	C	T	C	T
ss132473463	ENSMUSSNP1955728	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T
ss323768119	CHEV_11_83522877	CHEVERUD	SCREENING_POP	f	SNP					T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29478784					SNP	C	T	C	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:83600201 () rs orientation: forward

Symbol	Name	Function Class
D11Mit119	DNA segment, Chr 11, Massachusetts Institute of Technology 119	1599 bp distal
Tssr103748	transcription start site region 103748	279 bp downstream
Tssr103749	transcription start site region 103749	259 bp downstream
Tssr103750	transcription start site region 103750	1849 bp upstream
Tssr103751	transcription start site region 103751	1861 bp upstream
Wfdc18	WAP four-disulfide core domain 18	within coordinates