rs29480862 SNP Detail

Summary

• ID
  rs29480862
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:109221304 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGCTC CGTTTAAGCT CATTTGCAGG
  Y
  TGACCCTCCT TGGCAATCTG GATGC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss38853749	mCV24369049	ABI	CRAMUS_MOUSE	f	SNP	C	C	T	C
ss132784331	ENSMUSSNP4137969	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C		C
ss323845215	CHEV_11_109191792	CHEVERUD	SCREENING_POP	f	SNP					T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29480862					SNP	C	C	T	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:109221304 () rs orientation: forward

Symbol	Name	Function Class
Gm72366	predicted gene, 72366	within coordinates
Rr248322	regulatory region 248322	1104 bp distal
Rr369414	regulatory region 369414	861 bp upstream