rs29481633 SNP Detail

Summary

• ID
  rs29481633
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:57804078 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CAGCT CATGCCCGAG ATAGCATCTG
  Y
  ACACCTCCTC CAGCTAGGGG CGCAG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss38855836	mCV23857695	ABI	CRAMUS_MOUSE	f	SNP	C	T	C
ss132183712	ENSMUSSNP2456038	ENSEMBL	ENSEMBL_Sanger	f	SNP	C		C
ss323686471	CHEV_11_57726754	CHEVERUD	SCREENING_POP	f	SNP				C	C
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29481633					SNP	C	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:57804078 () rs orientation: forward

Symbol	Name	Function Class
D11Mit143	DNA segment, Chr 11, Massachusetts Institute of Technology 143	1485 bp proximal
Gm33078	predicted gene, 33078	within coordinates
Gm73794	predicted gene, 73794	1130 bp downstream
Rr234828	regulatory region 234828	within coordinates
Rr244432	regulatory region 244432	1306 bp distal
Rr244433	regulatory region 244433	969 bp distal
Rr250602	regulatory region 250602	within coordinates
Rr250603	regulatory region 250603	1924 bp proximal