rs29482142 SNP Detail

Summary

• ID
  rs29482142
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:73123644 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTAAAAAAA ACAAGAACAA
  GCCCTTGGTA TCCTAGGAAC TGCAGCTAAA ATGGAGCAGT GTGGTGAGGA ATGGTTGCTA
  AGCCTGGCTC TCATGCCCAG ACTAGTCATG TGATCTGAAA GTCATGTGAT CTGAATAACT
  GTCTAACACC TCCGAGTCAC AGGTTTCTCT TCAGCCACTT GAGTATGACA GTCTTTGCTC
  S
  CCCTTGCTCA GGGTTGTTAC TGGGCCTAGA GGTGGGTGTG GAGAAGCTCT TTGGTACCCC
  TTCTGCAGGG TGGCTGGGAG TTACTGTGCT CTGATGACTC CACTCTGGTC CCAGCTTTGT
  ACTACTCCAG GAGGAGCTGC AGTGGCTGGT CTGAGCTCCA TCCAGGCTGT GTCTGAACCA
  TGACTTGTTA AAGAAATAAA                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss38855441	mCV25414627	ABI	CRAMUS_MOUSE	f	SNP	C	G	C	C
ss132423023	ENSMUSSNP5499576	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	G		C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29482142					SNP	C	G	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:73123644 () rs orientation: forward

Symbol	Name	Function Class
Trpv1	transient receptor potential cation channel, subfamily V, member 1	1474 bp upstream