rs29482716 SNP Detail

Summary

• ID
  rs29482716
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:83328744 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTTCT CCTCCCTAAA TATTCTTGTC
  K
  TCCTCCATCA GTTCTCCTAT CTTTG                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss38857605	mCV23038066	ABI	CRAMUS_MOUSE	f	SNP	G	G	G	T	T
ss132469251	ENSMUSSNP2897876	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	G		T
ss323767164	CHEV_11_83251420	CHEVERUD	SCREENING_POP	f	SNP						G	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29482716					SNP	G	G	G	T	T	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:83328744 () rs orientation: forward

Symbol	Name	Function Class
1700020L24Rik	RIKEN cDNA 1700020L24 gene	within coordinates
Tssr3609	transcription start site region 3609	191 bp downstream
Tssr103697	transcription start site region 103697	267 bp downstream
Tssr103698	transcription start site region 103698	247 bp downstream
Tssr103699	transcription start site region 103699	210 bp downstream
Tssr103700	transcription start site region 103700	200 bp downstream