rs29483809 SNP Detail

Summary

• ID
  rs29483809
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:110665859 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGCAGGGGCC GGCAGAGGCA
  CCACTTCCCC CATACCTGAC ACCTTGACAT CTGACTCCAC CTTCACCAAA CATATCCCCC
  CTCTCCTTAT CTTTTTATAA AACACAACAC CTTGTAAATA GAGATTTAAA ATAAGAATGC
  TAAAAATGAA AGGCTGAAGA GATGACTCAG CAGTTAAGAA CCCTGGCTGC TCCTCCAGAG
  R
  ACCCGGGTTC AAGTCCAGCA CCCTAGATGA CAGCTGGAAG TCCCAGGGGT CTGACTCCAA
  GCATACTGCA TGTACACAGT ACACAGCCAT TCATTCAGGC AAACAGCTCT TCATAGACAG
  AAAAATAAAC TGAAACAAAA AAAAAAGTTA AAATGAACCA TGCTTAAGAC CCAAGCATCG
  GGACTGGAGA GATGGCTCAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss38863503	mCV24497740	ABI	CRAMUS_MOUSE	f	SNP	A	G	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29483809					SNP	A	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:110665859 () rs orientation: forward

Symbol	Name	Function Class
Gm60092	predicted gene, 60092	within coordinates
Rr472970	regulatory region 472970	350 bp distal
Rr472971	regulatory region 472971	within coordinates
Rr472972	regulatory region 472972	288 bp proximal
Rr472973	regulatory region 472973	1243 bp proximal
Tssr115233	transcription start site region 115233	321 bp downstream