rs29487747 SNP Detail

Summary

• ID
  rs29487747
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:76722830 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTTCCCAAGT GCTGGGATTA
  CAGATACACC CCCATGCCCG ACTATCTTCA CATCTCTTTC TCTTTTAAAA ATATTTTAAT
  TATGTGTATG TGTGTGCATG TCACATGCAT GCATGTGTCC TTGGAGGCCC AAACCATCAG
  ATCTTAGACT TATACACAAT TAGAAACCAT CTGAAGTCGG TGCTGAGCCA CCCCCCAACA
  Y
  ACACACAACT CAGGCAGCCA TCTCTACAGT CAGTATCCTT AATATTTCTC ACAATTATCA
  AATCATTTGT CTATATGTAT AGTCACTTCA GGATGTGATT CCTCCCCACA TCTCCCAAGT
  CTGGCATCAT GACGCCTAAT CAGGTTTGTG TTGAGCACCT CATCTTTGAA GGCCTCAGAA
  CACTACAATG GAATTTCAGT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J
ss38866097	mCV23154852	ABI	CRAMUS_MOUSE	f	SNP	T	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J
rs29487747					SNP	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:76722830 () rs orientation: forward

Symbol	Name	Function Class
Cpgi4784	CpG island 4784	459 bp proximal
Gm60317	predicted gene, 60317	218 bp upstream
Rr468227	regulatory region 468227	1496 bp distal
Rr468228	regulatory region 468228	203 bp distal
Rr468229	regulatory region 468229	407 bp proximal
Rr468230	regulatory region 468230	1144 bp proximal
Sptb	spectrin beta, erythrocytic	within coordinates
Tssr113983	transcription start site region 113983	240 bp upstream