rs29487958 SNP Detail

Summary

• ID
  rs29487958
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:12423402 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TAATC TGAATATTCT CCTTCTGTCT
  S
  GGTTTGTGTC CCTTTCATTC CCTTT                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss38872715	mCV25315910	ABI	CRAMUS_MOUSE	f	SNP		C	G					C		C
ss61349667	NES16962064	PERLEGEN	MM_PANEL2	f	SNP	C		G	C	G	C	C		C	C	C	C	G	G	C	C
ss137140954	ENSMUSSNP6470644	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	G							C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs29487958					SNP	C	C	G	C	G	C	C	C	C	C	C	C	G	G	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61349667	NES16962064	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:12423402 () rs orientation: forward

Symbol	Name	Function Class
4921511I17Rik	RIKEN cDNA 4921511I17 gene	within coordinates
Cyria	CYFIP related Rac1 interactor A	within coordinates
Rr259610	regulatory region 259610	1602 bp distal
Rr386868	regulatory region 386868	within coordinates