rs29489298 SNP Detail

Summary

• ID
  rs29489298
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:73421471 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAAAAAACCC AACAGAGAAA
  GATTAATAAC AGGAAAACCT GGTTCTCTGA GAAGCCCAAT AAAATGGGTA AGTGTCACAG
  ACAGGAGGAA AGTATCCTGA CTTTGCCTGC AGACCAAGAG TTGTATCTTA GACTGAACCG
  TGGCTGCAGT CTGTGCTTGA CCTTAATGCC ACCCAATCTG ACTGCAGCGG CCTCCAGTGG
  M
  CTCCCCAGAG TTAAGGGGAG AAAAGTTGGG AGCCCTTTGG CACCTTTTCT TCTGCAATGG
  CGTCCTTCTG GCCTGAACTG TGGGCAGCAG TCAGTTTTGG CCTTGCTCTC TTTTATTTCA
  TCCTTAGTCA GTGGGTGGAG GCCAAAATAG AGAAGAGCTC TCGGGAGTGT GTGTGTGTGT
  GTGTAGGGGA TGTAGTGTGT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss38871369	mCV24989972	ABI	CRAMUS_MOUSE	f	SNP	C	A	C	C
ss137886678	ENSMUSSNP3515188	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	A		C
ss324098186	CHEV_12_74475684	CHEVERUD	SCREENING_POP	f	SNP					C	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29489298					SNP	C	A	C	C	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:73421471 () rs orientation: forward

Symbol	Name	Function Class
D830013O20Rik	RIKEN cDNA D830013O20 gene	within coordinates
Rr257323	regulatory region 257323	within coordinates
Rr261220	regulatory region 261220	1130 bp proximal
Rr264130	regulatory region 264130	within coordinates