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rs29490608 SNP Detail
Summary
  • ID
    rs29490608
  • Variation Type
    SNP
  • Alleles
    A/G
Genome Location and Flanking Sequence
  • Location
    Chr12:65432687 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                                                AGAAACCACA ACTCAAGGGG
    GTGGGGAGGA CATTGTTGGA AAATACCAAA AATACCAGTT AAGAGTCATG AGGAAGTGGA
    AAGTCAAGAC AGTTTTCTAT GAGCCTCTAA CAATAGCACA TTTGCATATC GGGTTCCAGC
    AATGGTCAGG GTGGGTCAGG GTGACTTTCT TTGAATGAAC ACTCCCTGAA CCCAGGAAGC
    R
    GGTGGGTGGA GGAATGTTGC TATCTGTTTT ATGATTAGCA TGCCTTGGAG CATTGAGTCA
    CAAAGGTCAC ATTCTCAAGC CTGGGCCTAA AGGCCTAGAA TTTTGTCTTT TTATGTTATA
    CTTTTTCATT AACATGAGCG ACACTTTTCA TATACAGATG AACAGAGGTT GAAATTTCTT
    GTCTAGCAGA GGGTAAAACA                                            
    
    R = A/G
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
129X1/SvJ
A/J
C57BL/6J
DBA/2J
ss38874214 mCV25163244 ABI CRAMUS_MOUSE f SNP G A G G
SNP Consensus Information
SNP Consensus Type
129X1/SvJ
A/J
C57BL/6J
DBA/2J
rs29490608 SNP G A G G
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr12:65432687 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
Rr260997 regulatory region 260997 287 bp distal
Rr267826 regulatory region 267826 within coordinates
Rr387347 regulatory region 387347 within coordinates

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Funding Information
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last database update
12/17/2024
MGI 6.24
The Jackson Laboratory