rs29491120 SNP Detail

Summary

• ID
  rs29491120
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:33201337 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TATTGTGAAT AGTGCTTTTC
  TGAGCATCAA TGTGGTACAA TCATTTTTCA GACGGGAAGT GAGGCTGGAA ATATGAAATT
  GGAGTCATTT TGCCTCCCGA GCTATCTCGC CACTGCTGGG GCAGATACTG CAGGCACTGG
  CAGACTTTTT GAGTAATCTG GTAGTTGACA TCTCCTCCTG CATCCCTTCC TTTGCTTTGT
  Y
  GCCTATGCTG AGGAGGTCCT GTTAGCTGGA TGCTCTGAAG TTTCCGTGAA GAACCTTCCC
  ATCAGCCTTC CTATCCCCTC TAAAATTATA CTTACAGAGG ATTCAGCAAA GGCATTTGAA
  TTGCAAACTG TTGCTAGTTC CCTTTTGGCC TGGGCTTGTG AGGGCTGCCT TAGGGTAGCT
  TCACTGAAAG ACGAACTAGG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss38868269	mCV23134797	ABI	CRAMUS_MOUSE	f	SNP	T	T	C	C	C
ss137582768	ENSMUSSNP3196716	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29491120					SNP	T	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:33201337 () rs orientation: forward

Symbol	Name	Function Class
Atxn7l1	ataxin 7-like 1	within coordinates
Rr260247	regulatory region 260247	264 bp proximal
Rr260248	regulatory region 260248	864 bp proximal
Rr267129	regulatory region 267129	1464 bp proximal