rs29491675 SNP Detail

Summary

• ID
  rs29491675
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:110241900 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AAGTCCACAC TGTACACGTT TCTCATTGCA CAAAGCTTTA
  TTGGGCCCCT CCCAGAAGTC TCTCCAAGGG ATCCCGCCTG GGCCAGCCTG GGAGGTCTGC
  Y
  GGGCAAACAC AGAAATGCAT CTGCTGAACA GGCTGCTGGC CACTGAGGAA GAAGGGCCAG
  GAAGAGGGAG TGTGCTCCTT CAAGAAGAGT CCAGGCAGA                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss38875687	mCV24944674	ABI	CRAMUS_MOUSE	f	SNP	T	T	T	T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29491675					SNP	T	T	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:110241900 () rs orientation: forward

Symbol	Name	Function Class
Cpgi5110	CpG island 5110	1812 bp proximal
Dio3os	deiodinase, iodothyronine type III, opposite strand	within coordinates
Rr472865	regulatory region 472865	752 bp proximal
Rr472866	regulatory region 472866	1699 bp proximal