rs29492676 SNP Detail

Summary

• ID
  rs29492676
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:61500498 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTAAGAACA GCATTTGGTA
  CAGTGAAAAA AATAAAATAA AGTCATTACA GGATTCAGTT ATATAAGTCA CTTCAGAACA
  TCATCAATGG TTATGACTTA CTAAACCAAA CATAAAACAG ATTTCACCTT TTTCCCTGTT
  GTTCGGTGAC ACAAATGTTT TTATACAGCA GAGGCTGGCC ATTTTGAATA GGATAAAATT
  Y
  TTCTGTATGT GTTGCCTTAA TATCTTTCCT TCCTTCATAC ACATAGGCAG CTCACAATGC
  AGGGTACATG GCATAAGAAG CAATTCCACA GTAGTTGTTC TGACCTCTGG GAAGCTTCAT
  GTAGCCATTT TCTCCCCATC TTTCACCATG GCTGAAAGAA ATCAGGTTTT CCATTTACAA
  GAAAAGAAAC AGTACAATAG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss39071522	mCV25104785	ABI	CRAMUS_MOUSE	f	SNP	C	T	C	C
ss149102521	ENSMUSSNP5373538	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T		C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29492676					SNP	C	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:61500498 () rs orientation: forward

Symbol	Name	Function Class
Cts7	cathepsin 7	within coordinates