rs29494814 SNP Detail

Summary

• ID
  rs29494814
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr13:20791427 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCCAC TAGAGTGCCC ACATCGGAGT
  R
  TTAGGCTGAC ATTTCCTCCA TCCTT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss39075350	mCV24006212	ABI	CRAMUS_MOUSE	f	SNP		G	A						A
ss61757671	NES17682601	PERLEGEN	MM_PANEL2	f	SNP	G		A	A	A	A	A	G	A	A	A		G	A	G	G		A
ss148771593	ENSMUSSNP4007248	ENSEMBL	ENSEMBL_Sanger	f	SNP			A						A
ss324282851	CHEV_13_20699126	CHEVERUD	SCREENING_POP	f	SNP												A					A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs29494814					SNP	G	G	A	A	A	A	A	G	A	A	A	A	G	A	G	G	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61757671	NES17682601	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:20791427 () rs orientation: forward

Symbol	Name	Function Class
Elmo1	engulfment and cell motility 1	mRNA-UTR
Gm60937	predicted gene, 60937	848 bp downstream
Rr475587	regulatory region 475587	1819 bp proximal
Tssr118599	transcription start site region 118599	1843 bp downstream
Tssr118600	transcription start site region 118600	1796 bp downstream