rs29498096 SNP Detail

Summary

• ID
  rs29498096
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:31342484 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GTGTTCTTTT TCCTTTATGC CTTTATCCCC CTGCCTGGTT
  TCATGCCCCC TAACACTAGA TAGGAGAAAA ACAAGGATTA GGGGGAAAGG GAAAGAGAGA
  R
  AAAGAGGGAA AGGGGAAAGA GATCCCTCAA TCTAATTCTT TCCTTTTGTT TCTTCTTTGA
  CCATGGCTAC TAACAAACCA CAACCAAGCC CCTTAACTG                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39571265	mCV22897722	ABI	CRAMUS_MOUSE	f	SNP	A	A	G
ss145456773	ENSMUSSNP5809524	ENSEMBL	ENSEMBL_Sanger	f	SNP	A		G
ss325358770	CHEV_17_31260455	CHEVERUD	SCREENING_POP	f	SNP				G	A
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29498096					SNP	A	A	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:31342484 () rs orientation: forward

Symbol	Name	Function Class
Rr330604	regulatory region 330604	884 bp distal
Rr334775	regulatory region 334775	1717 bp proximal
Rr341219	regulatory region 341219	1084 bp distal
Tff3	trefoil factor 3, intestinal	1796 bp downstream