rs29500267 SNP Detail

Summary

• ID
  rs29500267
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:112797141 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  AGCCAAATTA ATGAAAAAGT AGTGAGAGAG ATAACTCAAA TTAATAAAAT TAGAGGCGAA
  AAGGGAAAAA TTACAACAGG CACCAAGGAA ATCCCATGAG CCGTGAGGAT GCACTTTAAA
  AATTTATAGA CAGCCAGGGC TATACAGAGA AACCCTGTCT CAGAAAACCA AAAAATTAAA
  AAAAAAATAA AAATAAAAAT TTATATTCCA CTAAACTGGA AAAAATCTGA AAGAAACAGG
  ATGAGTTTCT GGATGTGAAT GACCTGTCAA AGTGAAACCA AGACAGGAAA AAAAAGATTT
  R
  CACAGATCTG TAGCAACCAG CCAGATAGAA CTAGAAGCAG TAATTAAAAA TTCCCCAACT
  AAAAAAAGCC CAGGCCAGAT GGATTCAGTG CAGGATTCTA CCAGCCTTTC AAAGAACACA
  CAGCAGCGTT CCTCAAACTG TAATGTAAAA TATGAAAGAG GGAGCATTTC TAGAGTCTTC
  AGCCAGGGTG CCCTGCAAAG CCGCCCTTGT GTCCTCTCCC AACAACTTTG ACTCAAGTTC
  CTCGAGACAG GCTGTTGTCT GACAGAGTCT GTCTAGGACC CAGGAGAGCC ACCACAGCCA
                                                                   
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45819188	mCV24621828	ABI	CRAMUS_MOUSE	f	SNP	A	G	A	A
ss149087892	ENSMUSSNP5648391	ENSEMBL	ENSEMBL_Sanger	f	SNP		G		A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29500267					SNP	A	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:112797141 () rs orientation: forward

Symbol	Name	Function Class
Gm30529	predicted gene, 30529	within coordinates
Gm42865	predicted gene 42865	within coordinates