rs29500584 SNP Detail

Summary

• ID
  rs29500584
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:153470370 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATAAAATGCT ATCAGTCCTT
  TCATGGTTGG TTGAGTCCAC AGACACAGAC CACGGAACTT ACAGAGAGCT GTAACACTTA
  CCTCCACACC TGCATTCTGC TCCAGACAGT ATGCCCTGCC AGGTCTGGCT ATTTACTGCT
  CCTGTGACTC TCTAACTAAA GGAAGGCTCG GGCAGCAACA GTGTCTCTGT GGAGACCTGT
  Y
  GACAGTCAAC TCACCATTTG GAACCAGTAG GAGGCTTTTC ATGATGCTTT TGAGGGGGCC
  AAGACTGATC TGATTGCTGG TGGCAAATTC AGAGAGCTGA GCCAGAAATC GCTCCACCTG
  CAGAGAGGAG ACAGAACAAA CAAGCCAGTT GTTTACTTAC CTCTTAAAAA GGTTTAATTT
  GGGCTGGAGA GATGGCTTAG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	C57BL/6J
ss45320226	mCV25285423	ABI	CRAMUS_MOUSE	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	C57BL/6J
rs29500584					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:153470370 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Commd7	COMM domain containing 7			Intron
				Noncoding-Transcript-Variant
Rr567709	regulatory region 567709			1985 bp proximal