rs29501041 SNP Detail

Summary

• ID
  rs29501041
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:129061674 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TAATG TAAACACAAA ATATTTGAAG
  R
  AATGCTTGGA AAAGGTAACA AGGGA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45819802	mCV23582439	ABI	CRAMUS_MOUSE	f	SNP	G	A	A
ss144458676	ENSMUSSNP2831215	ENSEMBL	ENSEMBL_Sanger	f	SNP	G		A
ss321689246	CHEV_5_129490485	CHEVERUD	SCREENING_POP	f	SNP				G	A
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29501041					SNP	G	A	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:129061674 () rs orientation: forward

Symbol	Name	Function Class
Rr127046	regulatory region 127046	1074 bp distal
Stx2	syntaxin 2	within coordinates