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rs29501281 SNP Detail
Summary
  • ID
    rs29501281
  • Variation Type
    SNP
  • Alleles
    G/T
Genome Location and Flanking Sequence
  • Location
    Chr17:71451413 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                                          GAAGG AGGAAAGGGT TTGGCATAAG
    K
    ATCTTAGAGA GCTGAAGACA TAGCA                                      
    
    K = G/T
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
129S1/SvImJ
129X1/SvJ
A/J
C57BL/6J
DBA/2J
LG/J
SM/J
ss39573747 mCV22280564 ABI CRAMUS_MOUSE f SNP G T T G T
ss145891624 ENSMUSSNP6034712 ENSEMBL ENSEMBL_Sanger f SNP T T T
ss325441840 CHEV_17_71493758 CHEVERUD SCREENING_POP f SNP T G
SNP Consensus Information
SNP Consensus Type
129S1/SvImJ
129X1/SvJ
A/J
C57BL/6J
DBA/2J
LG/J
SM/J
rs29501281 SNP G T T G T T G
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr17:71451413 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
1600022D10Rik RIKEN cDNA 1600022D10 gene 77 bp upstream
Rr530422 regulatory region 530422 809 bp proximal

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
12/17/2024
MGI 6.24
The Jackson Laboratory