rs29501507 SNP Detail

Summary

• ID
  rs29501507
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:127932068 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GGAATACACT TTCAACACTT ACACATGTGG TAGGGTAGTC
  CAAGTATATT CCATTTCCAT GCATACTGTT GATTCCTCCA GTGGTCCAAC ATTACTGAAA
  R
  CAGAGGACAG GTGCTTTAGT CTAACCCATG AAGATGTTCT ATACATGCAC CTCCAAGAAG
  ACAGAAGACA TGAGCAGCGA GAACATACAG CTGCAGCAA                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45320436	mCV25150691	ABI	CRAMUS_MOUSE	f	SNP	G	A	G
ss147551158	ENSMUSSNP1108661	ENSEMBL	ENSEMBL_Sanger	f	SNP	G		G
ss320501502	CHEV_2_127915884	CHEVERUD	SCREENING_POP	f	SNP				A	G
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29501507					SNP	G	A	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:127932068 () rs orientation: forward

Symbol	Name	Function Class
Acoxl	acyl-Coenzyme A oxidase-like	Intron
Gm23101	predicted gene, 23101	88 bp downstream
Rr564642	regulatory region 564642	1700 bp distal
Rr564643	regulatory region 564643	1183 bp proximal