rs29501674 SNP Detail

Summary

• ID
  rs29501674
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:20646580 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  AAACAGTATT GGAAGTGCGT GGCAGGTGAA TATTACGACA CTGAGACAAT TCTCTTAGCC
  TGTCCATGAG AACAGTGGTC ATGTATATGT GTAGTGGGCA TCATGAAAAC TAGTTTACCA
  TTAGCTTATG TTCTGTATAT TTACTTTACA GTGTAATCTT TTTCCCTCTC CAAGGTATAG
  CAAAGTTATA GAAATCATTG TATTACCCTT CAAACACACT GCTTTGGAAG CCAGCATTTA
  GGACAGATTT TTTTTTCCCT AGGGCAATGA AATGCAGGCT GTGCGTGCGC GCGCGCACAC
  R
  CACACACACA CACACACACA CACACACAAC AAATACACAA CACACACACA CACCCCTATA
  TCTCCTCACC TCACAAAGGA AAGCCATGAC AAACCAAAGT ATCAGCGAGT TTTTATTGGG
  ATTACTAAAG GGACTAGGGT GAGGGGTTGC TTACAAGAGC AGGGATGACT CAAAAGCAGC
  TGCATCCCGG AAAGCCGTCC CTGGCACTGG GGAGGACTCA GGCAAGATGC AGCCCTGGGG
  TTCTCAGCAC AGCTTGCAGG CAAGAGATTG TTGTCCAAGA GATCACCTAC GCCTATAAAG
                                                                   
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J
ss45322899	mCV25435214	ABI	CRAMUS_MOUSE	f	SNP	A	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J
rs29501674					SNP	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:20646580 () rs orientation: forward

Symbol	Name	Function Class
Etl4	enhancer trap locus 4	within coordinates
Rr366849	regulatory region 366849	within coordinates