rs29502167 SNP Detail

Summary

• ID
  rs29502167
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:152653066 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACCTGGCAAA AAGAATGCAT
  ATAAATTACT GAGTACAGCA CTTGGTACTT AGTGATCACT CAAAAGGTGT ACACAGAAAG
  TTCCAGGACA CCCAGGTCTA CACAGAAAAA CTCTGTAAAA AACCAAAACC AAACCAACCA
  AACCAGATAA ACAAAGGTAG GTCGAAAGAA CGCTATTAAC AGTGTTCTTA GTAGATGCAG
  Y
  TTAGTTGTTT TGAGACAGAC AGGGTTTTTC CAGGTTGGCT TTCGACTCTC TGTGTAGCTG
  AGGAGGCTGC TGAACTCCTC TTTCCAGACA CTGAGCTACG TGTCCTCTGT ACCCCACTTT
  AACTTAGGTT CTAAAAAGCT GACCTGGCTG CAGTGTTGAG GCAGGTGTAA TTTTTCTACA
  GTCTTGTTCT CCTGCCTTTT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45323289	mCV27575707	ABI	CRAMUS_MOUSE	f	SNP	T	T	C	T	T
ss147974845	ENSMUSSNP2254298	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	C		T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29502167					SNP	T	T	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:152653066 () rs orientation: forward

Symbol	Name	Function Class
A630035D09Rik	RIKEN cDNA A630035D09 gene	within coordinates
Bcl2l1	BCL2-like 1	within coordinates
Rr374093	regulatory region 374093	within coordinates
Rr567479	regulatory region 567479	within coordinates
Tssr20835	transcription start site region 20835	674 bp downstream