rs29503002 SNP Detail

Summary

• ID
  rs29503002
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:24011013 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATCTG CCTGCCTCTG TATCTTGATT
  S
  CTGAGGTTAA GGGCTTGCAC CAAGA                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39572602	mCV25239268	ABI	CRAMUS_MOUSE	f	SNP	C	G	C
ss145332912	ENSMUSSNP4029397	ENSEMBL	ENSEMBL_Sanger	f	SNP	C		C
ss325327393	CHEV_17_23929006	CHEVERUD	SCREENING_POP	f	SNP				C	C
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29503002					SNP	C	G	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:24011013 () rs orientation: forward

Symbol	Name	Function Class
Cpgi8694	CpG island 8694	1225 bp distal
D930048G16Rik	RIKEN cDNA D930048G16 gene	within coordinates
Gm52285	predicted gene, 52285	within coordinates
Rr339285	regulatory region 339285	212 bp distal
Srrm2	serine/arginine repetitive matrix 2	within coordinates
Tssr142954	transcription start site region 142954	1369 bp downstream