rs29505318 SNP Detail

Summary

• ID
  rs29505318
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:45577194 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TTGCCCTGTG TCATGGAGAT CCTGCAGCGT TGGATCAGCA
  GGACTGGCCC TTTCACATGT CCCAACAGTT CACAAATGAG ATAGATTTTA GGGCGGGCCA
  W
  CTCAGAGCCC TGGATCTGGA CCTGGGTGGT AATGGAGGTG ATCAGTTCAC TGGCCTCTCC
  CTTATCTGCA GCACCAGGGC AAGCTCTCCA GCACTGCTG                       
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
ss45820541	mCV23485838	ABI	CRAMUS_MOUSE	f	SNP	A	T	A	T
ss148351368	ENSMUSSNP6589916	ENSEMBL	ENSEMBL_Sanger	f	SNP		T		T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
rs29505318					SNP	A	T	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:45577194 () rs orientation: forward

Symbol	Name	Function Class
D5Ertd615e	DNA segment, Chr 5, ERATO Doi 615, expressed	within coordinates
Gm71490	predicted gene, 71490	232 bp upstream
Rr611049	regulatory region 611049	within coordinates
Rr611050	regulatory region 611050	111 bp proximal
Rr611051	regulatory region 611051	387 bp proximal
Rr611052	regulatory region 611052	476 bp proximal