rs29506800 SNP Detail

Summary

• ID
  rs29506800
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:73294443 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCCCTGGAGC TAACAAAGTA
  GCCTCAGCCC ATGAACTACG ATGCATATCA CCTTGCCCAG CTTTTAAAAA TATAAGATCT
  GGGAACCGCA CGTAAGTCCT CATGCCTGTA ACTCCTCAAC CCCACATTAT AGACTTGCTG
  AAGAGAAACA TCAAAACTAT GGTCCCCTCC CTCAGGGCTC TTAAGGTCTC GGTAAGAAAA
  W
  TCATTGTTGC ATGGTACTTG AGACTAATTT TAAAGGAGAA AATGTGGATT CATGAATATA
  TATTGGAGCT CTTTGACAAC AAAGGTCTTT GCCACCTTAC ATAAGTAGGT GAGATAAAGT
  TACTACTAAA GAGATGAGAA CAATAACATT CATTACACAA CTGTATGATT CCCTATGGGA
  TTTAAGCACG TAAGTAGTTA                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J
ss39574610	mCV23496727	ABI	CRAMUS_MOUSE	f	SNP	A	T	T	T
ss145927780	ENSMUSSNP4914840	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J
rs29506800					SNP	A	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:73294443 () rs orientation: forward

Symbol	Name	Function Class
Gm23649	predicted gene, 23649	350 bp upstream