rs29507586 SNP Detail

Summary

• ID
  rs29507586
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:24004410 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTATG CGGGAGGCAT CCCACAGGGA
  R
  ACATAAGAAA ATGGCAGTCA CCCTC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39575318	mCV25239021	ABI	CRAMUS_MOUSE	f	SNP	A	A	G	A
ss145332653	ENSMUSSNP1293422	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A		A
ss325327330	CHEV_17_23922403	CHEVERUD	SCREENING_POP	f	SNP					A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29507586					SNP	A	A	G	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:24004410 () rs orientation: forward

Symbol	Name	Function Class
Cpgi8693	CpG island 8693	335 bp proximal
Flywch2	FLYWCH family member 2	within coordinates
Rr523143	regulatory region 523143	within coordinates
Rr523144	regulatory region 523144	635 bp proximal
Rr523145	regulatory region 523145	936 bp proximal
Rr523146	regulatory region 523146	1944 bp proximal
Tssr146663	transcription start site region 146663	610 bp downstream
Tssr146664	transcription start site region 146664	655 bp downstream
Tssr146665	transcription start site region 146665	761 bp downstream