rs29508234 SNP Detail

Summary

• ID
  rs29508234
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:86737853 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTGAA AGCTGTGGCT TTCTTGCTCT
  K
  TACTATCTGC CCTAGGGCAA GACAT                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	SM/J	WSB/EiJ
ss45819780	mCV23427581	ABI	CRAMUS_MOUSE	f	SNP		T	G					G
ss46593360	NES10431632	PERLEGEN	MM_PANEL2	f	SNP	T		G	G	T	G	T		T	T	G	T		G	T	T		T
ss148782261	ENSMUSSNP2143966	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	G
ss321598999	CHEV_5_87019019	CHEVERUD	SCREENING_POP	f	SNP													G				T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	SM/J	WSB/EiJ
rs29508234					SNP	T	T	G	G	T	G	T	G	T	T	G	T	G	G	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46593360	NES10431632	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:86737853 () rs orientation: forward

Symbol	Name	Function Class
Tmprss11f	transmembrane protease, serine 11f	within coordinates
Tssr51538	transcription start site region 51538	1439 bp downstream