rs29511130 SNP Detail

Summary

• ID
  rs29511130
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:4108329 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCAGGTGGCT TCTTGTGAAC
  CAGTCTCCTA ATGAATAAAG GAGCCAATCA CTGGGCAAGT AGGAGGGACT TCTGGGTTGG
  ATGGACAAAA ATAGGTGGCA GGAGAGAGTT AGACCCTCTT TGGAATGGGA CAGCAGACAG
  GTAAGATGTA GTTGCTAGAG TTTCTGGTAT CATGGCAAAT TTGCAAGGAA TTGGATTTTT
  W
  AAAAAAAAAA TGTATTTATT ATTATAAATA AGTACAGTGT AGCTGTCTTC AGGTGCACCA
  GAAGAGGGCA TCAGATCTCG TTACAGGTGG TTGTGAGCCA CCATGTGGTT GCTGTGATTT
  TAACACTGAG CCTTCTGAAG AACAGTCAGT GCTCTTATCT CAGCCAGTAA TTGGATTTTA
  CTTTTTTTTT TTTTTTTTTT                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J
ss39076189	mCV27548393	ABI	CRAMUS_MOUSE	f	SNP	A	A	A	T
ss148629332	ENSMUSSNP7184053	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J
rs29511130					SNP	A	A	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:4108329 () rs orientation: forward

Symbol	Name	Function Class
Akr1c14	aldo-keto reductase family 1, member C14	within coordinates
Rr474440	regulatory region 474440	54 bp proximal
Rr474441	regulatory region 474441	1107 bp proximal
Tssr118214	transcription start site region 118214	1236 bp upstream
Tssr118215	transcription start site region 118215	1258 bp upstream
Tssr118216	transcription start site region 118216	1342 bp upstream