rs29511444 SNP Detail

Summary

• ID
  rs29511444
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:75141514 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  TGGGTTGGTT TTTTTTTTTT TTTTTTTTTG GTCTAGGCTA AATGAACTGG TGTTAGCCCT
  CCGGTCTCAT CACACACTAA TCTCTTCCTT GGGTTCTATG ATGTGAGCAG TTTTTACCCT
  TCCAAGTCGC AGACCTAATG TTTCCCCGCA AGATCAGTAA CAGCTTAACC CTCCTCCATT
  GGGCAGTGTC TCCAGGCAAT AGAGATCTGC CTGCAAGGTG GCAGAGCCCC AACTGAAGTG
  ACATTTCAAA GAAAAGAAGT AATTTCCTTC CCAGTTTCTC CATTAATACA AGGGGGGGGG
  K
  GCAGGCTCCT TGTGCAACAT CAGACATTGG GAGCCCATAG CCAGGGTAGA CACAAAAGGG
  TGACAAGGGG CCTTAAATGG CCTTCTTGTT CACAGTAAAA GTGAATTCCG TTCCCTCAGG
  CTGATCCCCA GGGAAGACTC CAATAAGACA GGGAAAAGCC AGGCTGAGAT CCTTTGGGAC
  TGGGATAAGT TTTATGAAGT GAATCTTTGA ATTACTAAAA CAGAGGCTGG GCATGGAGCT
  CAGTTGGTAG ACTGCTTGCC TGGCATGGTT TGATCCCCAG CACCAAATAA ACCTGGTGTG
                                                                   
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss45823617	mCV23006434	ABI	CRAMUS_MOUSE	f	SNP	G	T	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs29511444					SNP	G	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:75141514 () rs orientation: forward

Symbol	Name	Function Class
Gm52777	predicted gene, 52777	within coordinates
Tssr46681	transcription start site region 46681	947 bp downstream