rs29512565 SNP Detail

Summary

• ID
  rs29512565
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:143833728 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTCTA CGCCATGTGC TTGCACAGCC
  R
  ACACCTACTC ACGGCGCTGC CCCCC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45822171	mCV23731789	ABI	CRAMUS_MOUSE	f	SNP	A	A	G	A
ss144604686	ENSMUSSNP2063766	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A		A
ss321708651	CHEV_5_144657779	CHEVERUD	SCREENING_POP	f	SNP					A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29512565					SNP	A	A	G	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:143833728 () rs orientation: forward

Symbol	Name	Function Class
Ankrd61	ankyrin repeat domain 61	1843 bp upstream
Eif2ak1	eukaryotic translation initiation factor 2 alpha kinase 1	within coordinates
Tssr54383	transcription start site region 54383	1917 bp upstream
Tssr54384	transcription start site region 54384	1835 bp upstream
Tssr54385	transcription start site region 54385	1819 bp upstream