rs29513218 SNP Detail

Summary

• ID
  rs29513218
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:55590579 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CCCAAAGGTC CACTTCCTGT CTTAGCCAAA TAATTGGTTG
  CAAGCAGCCA AACCAGATTC TGGGTAATTT AAGACCAGGA AGAGACTGGA CAGCTCTTGG
  R
  AGGGAGCTTG TTTGAATTCC CCATGCTGGC TTAACATCGC TGACCTCTAG CCCCCCAGCC
  TCCAACCCCA GCATCACCAC TACCCCTCCC ACAATGAAT                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39077176	mCV22990935	ABI	CRAMUS_MOUSE	f	SNP	A	A	G	G	A
ss149037076	ENSMUSSNP4308194	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	G		A
ss324345517	CHEV_13_55544127	CHEVERUD	SCREENING_POP	f	SNP						A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29513218					SNP	A	A	G	G	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:55590579 () rs orientation: forward

Symbol	Name	Function Class
Cpgi5671	CpG island 5671	1738 bp proximal
Gm61404	predicted gene, 61404	775 bp downstream
Rr281448	regulatory region 281448	1021 bp proximal