rs29515383 SNP Detail

Summary

• ID
  rs29515383
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:62532360 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  TAACTACAGT CATTTGAAAT AATTACATTG GTGGCAACAA CAGTTGACAG GAAGTTCAGT
  TTTTATCCAG ATTCTTTCTT TTTAGATTTA TATATTTATT TTATGTATAT GAGTACAATG
  TAGCTGTACA GATGGTTGTG AGCCTTCATG TGGCTGTGGA GAATTAAATT TTTCAGACCT
  CTACTTTGGT CAACCCCACT CAGTCCCTGC TTGCTCTGGC CCAAAGATTT ATTTATTCTT
  ATTATACATA ATTACACTGT AGCTGACTTC AGACACTCCA GATCTCATTA TGGATAGTTG
  T
  GAGCACCATG TGGTTGCTGG GATTTGAACT CAGGACCTTG GGAAGAGCAG TCAGTGTTCT
  TACCGGCTGA GCCTTCTCCC CAGCCCCTTT ATCCAGATTA TTAATTTCCT GGTCTGCAGA
  ACGGAGTAAT GGCCAGTCAA GGTGACTATC AAGATGGAAA ATTGGTGACC TCACTACTCA
  TTGCTAATGT CAAGTACAGC CATACCAGGA AAACTTTCAC CTTCAAAGCC TAGCCTAGAA
  GAGATTCAGG ATTGTCTTCC CAAAATGTGA CTTTAGAGAC AGGATTAGAT GTTCAAGGCA
                                                                   
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss39079201	mCV22679097	ABI	CRAMUS_MOUSE	f	SNP	T	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs29515383					SNP	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:62532360 () rs orientation: forward

Symbol	Name	Function Class
Gm3604	predicted gene 3604	1369 bp upstream
Gm23855	predicted gene, 23855	372 bp upstream
Gm48690	predicted gene, 48690	558 bp upstream
Gm55564	predicted gene, 55564	1202 bp downstream
Rr281523	regulatory region 281523	760 bp distal
Rr403806	regulatory region 403806	1172 bp downstream