rs29515434 SNP Detail

Summary

• ID
  rs29515434
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:69938563 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGAAGAAACG TGACACAGAC
  ATATCGGATT TTGCCCAGCG TGAGGGAAAC TCCTAAGAAG TAAAGGTGTA CTAGCCTTTT
  CTCATTGCTG AGATAAAATA CCTTCCAAGA AGCAAATTAA GGAAGGAAGG GTTTATGGTG
  GCTCCTGGTG CAGGGTGACA TGGTTTATGA CGGCAGGGGT GTCACTTGTG ATACATGATC
  R
  CTGTATCTTC ATAAGTAGAA GTGGAGAAAG GCTGAGAAGT GTCTCATGGT TTGCATATGC
  TTAGCCCAGG AAGTGGCACT ATTAGAAGAT GTGGCCCTGT TGTAGTGACC TTGTTGGAGT
  AGGTATATCA CTGTGGGTGT GAGCTTTAAG ACTGTCATCC TAGCTGCCAG TATTCTGCTA
  GCAGCCTTCA GATGAAGATG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39076607	mCV22673265	ABI	CRAMUS_MOUSE	f	SNP	G	A	A	A
ss144577509	ENSMUSSNP4927812	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A		A
ss324407092	CHEV_13_69929322	CHEVERUD	SCREENING_POP	f	SNP					G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29515434					SNP	G	A	A	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:69938563 () rs orientation: forward

Symbol	Name	Function Class
Gm60947	predicted gene, 60947	within coordinates
Rr273521	regulatory region 273521	363 bp distal
Rr284799	regulatory region 284799	1639 bp proximal