rs29515587 SNP Detail

Summary

• ID
  rs29515587
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:32532500 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ATTTATTATG TAACTGCTTC TTATCTCTAT CTACTACTTA
  CACTTATTCA AGACCAAAAG CACAGCGATG GTACATCACT CTGTGTAATG TATAAAATTG
  R
  TATTGTTCTT TCTATAAGGG TTATCTAGGA ATTTACAAAG CCCCAAAGTT TAACAGTATG
  TATACAGGTA ATCTTAATTG AAACCAGCTT TCTTTTATT                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NZW/LacJ	PWD/PhJ	SM/J
ss39076411	mCV24937791	ABI	CRAMUS_MOUSE	f	SNP		G					A		G
ss49081334	NES12432857	PERLEGEN	MM_PANEL2	f	SNP	A	G	G	G	G	G		G	G	A	G		G	G	G
ss148848296	ENSMUSSNP3714089	ENSEMBL	ENSEMBL_Sanger	f	SNP		G							G
ss324312047	CHEV_13_32440386	CHEVERUD	SCREENING_POP	f	SNP												G				G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NZW/LacJ	PWD/PhJ	SM/J
rs29515587					SNP	A	G	G	G	G	G	A	G	G	A	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49081334	NES12432857	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:32532500 () rs orientation: forward

Symbol	Name	Function Class
Rr388214	regulatory region 388214	within coordinates