rs29517157 SNP Detail

Summary

• ID
  rs29517157
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:129714782 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACATA TGTCCTGTAG GTTCTGTCTG
  W
  AATCTTCCAG GGTTCAGGCT TCACA                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	C57BL/6J	DBA/2J	LG/J	SM/J
ss45324116	mCV25265676	ABI	CRAMUS_MOUSE	f	SNP	A	T	T
ss147591231	ENSMUSSNP419676	ENSEMBL	ENSEMBL_Sanger	f	SNP	A		T
ss320505889	CHEV_2_129698598	CHEVERUD	SCREENING_POP	f	SNP				T	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	C57BL/6J	DBA/2J	LG/J	SM/J
rs29517157					SNP	A	T	T	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:129714782 () rs orientation: forward

Symbol	Name	Function Class
Gm75517	predicted gene, 75517	865 bp upstream
Rr564987	regulatory region 564987	1276 bp distal
Rr564988	regulatory region 564988	662 bp proximal
Rr564989	regulatory region 564989	849 bp proximal