rs29517650 SNP Detail

Summary

• ID
  rs29517650
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:46740037 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  TGTGTGTGTG TGTGTGCCCA ATGAGCAGCC ACAACTCAAA CGGGCTCAAA GCTGAATAGT
  GGGCAGGGCT GGTGGAGGGG CGGGGCATAT CAGCGGGCTC CTATAGTTGC TGCTTGGACT
  AAGCTATCTC ATGAAGAACC ATGAGCTGGA CTTGTCCGCG TTGTCAGCAA CCCGTTTACT
  TTGGTAAGGC TGGGACCTAG GAGGAGTAAA GGCAACCTTG AGCCCCCGGG TCCCCTGTAT
  TTGTGTGTGT GTGTGTGTGT GTGTGTGTGT GTGTGTGTGT GTGTGTGTGT GTCTCTCGCG
  M
  GCGCTTGCGC TTGAAAACAA AGTGCCTGCC ACACCTCCAA GAGCCCAAGC AAGAGACACC
  AGGGTGGGAT GGAGCTTCTT CCTGGAAACA ATATTCATTG TCTCCAGGGA GCGAGGCTGG
  CTGGGCCGGT TTTCCCAGAA GGCTGAAAGG GCAAAAGCAG GGCTGGGCTG GATTTTTTGC
  AGCCCGAACC CACCTTGTTC CCCACAGCTG AGAAGGTGAG CTCCTTAGGC AAGAACTGGC
  ACCGTTTCTG CCTGAAATGT GAGCGCTGTC ACAGCATCTT GTCCCCTGGC GGGCATGCAG
                                                                   
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss39578247	mCV23183630	ABI	CRAMUS_MOUSE	f	SNP	A	A	C	C	C
ss145699441	ENSMUSSNP813102	ENSEMBL	ENSEMBL_Sanger	f	SNP			C		C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29517650					SNP	A	A	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:46740037 () rs orientation: forward

Symbol	Name	Function Class
Crip3	cysteine-rich protein 3	within coordinates
Rr527733	regulatory region 527733	150 bp distal
Rr527734	regulatory region 527734	within coordinates
Tssr144853	transcription start site region 144853	182 bp downstream
Tssr144854	transcription start site region 144854	162 bp downstream