rs29520852 SNP Detail

Summary

• ID
  rs29520852
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:40830370 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CAGTCTGTGC TTCATCTTTG TTCCTACATA TCTTGAAGGG
  AAGACAAATT TTGGGTCAAA ATTTTGTGGA TGAATTCTTA TTTTCCAAAA TTATTTGTTG
  W
  TAAAGATAGT AGAATAGAGA CAAGCAATAC TCTATTATAT CATCACAGAT CAAGAAAGAA
  AGGAAGAAAA CAAAAAAAAA TCCATGCAAT GAAAACCAT                       
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss39577399	mCV24452193	ABI	CRAMUS_MOUSE	f	SNP	A	A	A	T
ss145609443	ENSMUSSNP6800403	ENSEMBL	ENSEMBL_Sanger	f	SNP	A			T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29520852					SNP	A	A	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:40830370 () rs orientation: forward

Symbol	Name	Function Class
Esp8	exocrine gland secreted peptide 8	543 bp upstream
Gm49847	predicted gene, 49847	678 bp downstream
Rr337560	regulatory region 337560	630 bp distal
Rr392616	regulatory region 392616	75 bp downstream
Tssr144637	transcription start site region 144637	540 bp upstream
Tssr144638	transcription start site region 144638	551 bp upstream