rs29521335 SNP Detail

Summary

• ID
  rs29521335
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:118092095 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GACCC TCACAGGTGA TGGATGTCAG
  R
  GCTCCTAGAA CCTCCAACTG TTTTT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45327818	mCV23826926	ABI	CRAMUS_MOUSE	f	SNP	A	A	A	G	A
ss147293612	ENSMUSSNP854064	ENSEMBL	ENSEMBL_Sanger	f	SNP		A			A
ss320468254	CHEV_2_118087350	CHEVERUD	SCREENING_POP	f	SNP						G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29521335					SNP	A	A	A	G	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:118092095 () rs orientation: forward

Symbol	Name	Function Class
Gm29232	predicted gene 29232	within coordinates
Gm75384	predicted gene, 75384	1990 bp upstream
Rr397203	regulatory region 397203	1654 bp upstream
Rr563205	regulatory region 563205	1581 bp distal
Rr563206	regulatory region 563206	1500 bp proximal
Rr563207	regulatory region 563207	1703 bp proximal